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Compugen releases breakthrough biotech product
By Buzzy Gordon

TEL AVIV (September 20) - Tel Aviv-based Compugen Ltd. announced yesterday the commercial availability of its first product for proteomics research - the Z3 gel analysis system, which revolutionizes the identification and analysis of complex mixtures of the proteins that make up human genes.

Proteomics, the study of genes at the protein level, is a more precise scientific method of identifying drug targets, therapeutic proteins, and diagnostic markers. This rapidly growing field is expected to have far-reaching implications for drug development and discovery.

"Protein mixtures from different tissues need to be separated to reveal the effects of disease or drugs," said Michal Preminger, vice president for proteomics business at Compugen. "Once an image is created in a two-dimensional gel, the location of certain proteins can be pinpointed, stained, and studied. The resulting analysis can determine whether a protein is from normal or cancerous tissue, for example."

The Z3 system employs Compugen's patent-pending proprietary algorithms to automatically align two images within a few seconds, with greatly improved accuracy. Analyzed images are then displayed using color overlay technology that makes the data visually accessible. Furthermore, Z3 provides research-oriented tools for data mining and querying, allowing scientists to extract a vast amount of information from 2D gels in general, and large-scale experiments in particular.

The comparison of the protein images has manifold applications, Preminger explained, including therapeutic drug target discovery and studying possible toxic side-effects of new drugs being developed for treatment of cancer.

"Z3 has been in beta test since early this year at a number of commercial and academic institutions and has been enthusiastically received," said Ze'ev Smilansky, Compugen's vice president for proteomics.

"The tremendous contribution of Z3 is that what previously had to be done manually can now be accomplished automatically," added Preminger.

Brad Walsh of Australian Proteome Analysis said that "after testing Z3, we believe it is a revolutionary image analysis package with great potential for bringing a paradigm shift to the way 2D gels are analyzed."

Helmut Meyer, CEO of Prot@gen, a proteomics company known for its expertise in 2D gels, said, "Compugen's Z3 image analysis software takes only 10 minutes to provide complete analysis of proteins, compared with the up to two days for rival products. Z3 helps take the bottleneck out of image analysis."

The Z3 software system is now commercially available under various licensing arrangements, including a pay-per-gel subscription model.

 

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